Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs13196688 chr6:3265363 T/C 0 119 4.13 42.25 38.58 KM Plot
THYM rs13207402 chr6:3265410 G/A 0 119 4.13 42.25 38.58 KM Plot
THYM rs13207413 chr6:3265422 G/A 0 119 4.13 42.25 38.58 KM Plot
THYM rs13207416 chr6:3265439 G/T 0 119 4.13 42.25 38.58 KM Plot
THYM rs13209899 chr6:163071456 C/G 0.000281 118 46.23 27.33 25.4 KM Plot
THYM rs13214730 chr6:123758017 C/G 1.81E-8 116 38.58 46.6 12.63 KM Plot
THYM rs13215538 chr6:163037975 T/C 0.000256 119 46.23 27.33 25.8 KM Plot
THYM rs13248571 chr8:50093642 A/G 2.37E-10 119 48.33 46.07 25.83 KM Plot
THYM rs13253391 chr8:50067401 T/C 3.34E-10 117 46.6 50.1 25.83 KM Plot
THYM rs13257469 chr8:50183257 C/T 2.69E-10 118 46.07 51.53 25.83 KM Plot
THYM rs13260469 chr8:50148200 A/G 3.26E-10 117 46.27 51.53 25.83 KM Plot
THYM rs13261065 chr8:50103898 A/G 2.31E-10 119 46.27 50.1 25.83 KM Plot
THYM rs13267089 chr8:50087090 C/A 4.63E-10 117 46.27 50.1 25.83 KM Plot
THYM rs13268333 chr8:50118775 C/G 2.37E-10 119 48.33 46.07 25.83 KM Plot
THYM rs13272842 chr8:50075439 A/G 4.47E-10 117 46.6 49.4 25.83 KM Plot